p-value: | 1e-194 |
log p-value: | -4.480e+02 |
Information Content per bp: | 1.765 |
Number of Target Sequences with motif | 87.0 |
Percentage of Target Sequences with motif | 1.10% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 93.4 +/- 49.4bp |
Average Position of motif in Background | 142.2 +/- 27.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0151.1_ARID3A/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCATATTAAAAG ----ATTAAA-- |
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MA0142.1_Pou5f1::Sox2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCATATTAAAAG ATTTGCATAACAAAG- |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GCATATTAAAAG AAAATATGCATAATAAA-- |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCATATTAAAAG ATTTGCATAACAATG- |
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PB0148.1_Mtf1_2/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCATATTAAAAG-- AAATAAGAAAAAAC |
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PH0075.1_Hoxd10/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCATATTAAAAG---- AATGCAATAAAATTTAT |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCATATTAAAAG --GTCATAAAAN |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCATATTAAAAG -NCYAATAAAA- |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCATATTAAAAG NGCAATTAAA-- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCATATTAAAAG GHATATKCAT-- |
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