Information for 11-CCCAGTTTCTAA (Motif 11)


Reverse Opposite:

p-value:1e-65
log p-value:-1.498e+02
Information Content per bp:1.894
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets118.0 +/- 61.7bp
Average Position of motif in Background88.0 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCAGTTTCTAA
--CGGTTTCAAA

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCAGTTTCTAA-----
--NNNTTTNTAATACNG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCAGTTTCTAA-
---ATTTTCCATT

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCAGTTTCTAA--
--CTGTTGCTAGGS

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCAGTTTCTAA-----
--AGNGTTCTAATGANN

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCAGTTTCTAA---
TNTGGTTTCGATACN

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCAGTTTCTAA-
TGTTCCCATTGTGTACT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCAGTTTCTAA----
-NCCGTTGCTANGNGN

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCAGTTTCTAA
----TTTTCCA-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCAGTTTCTAA
--TGGTTTCAGT