Information for 8-GAAAGGGAACTC (Motif 8)


Reverse Opposite:

p-value:1e-68
log p-value:-1.566e+02
Information Content per bp:1.959
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.7 +/- 46.3bp
Average Position of motif in Background102.7 +/- 46.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGAACTC
GAGAACCGAAACTG

MA0051.1_IRF2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGAACTC-----
GGAAAGCGAAACCAAAAC

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGAACTC-
TTAAGAGGAAGTTA

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACTC
AAAGRGGAAGTG

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACTC
GAAAGTGAAAGT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGGAACTC
AGAAACGAAAGT-

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAAAGGGAACTC
GAAACTGAAACT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACTC
GAAASYGAAASY

MA0050.2_IRF1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGGGAACTC----
AAANNGAAAGTGAAAGTAAAN

MA0080.3_Spi1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGAACTC-
AAAAAGAGGAAGTGA