Information for 6-CTACADTTCCCA (Motif 6)


Reverse Opposite:

p-value:1e-85
log p-value:-1.969e+02
Information Content per bp:1.791
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif73.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets90.4 +/- 53.9bp
Average Position of motif in Background79.3 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CTACADTTCCCA
ACTACAATTCCC-

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CTACADTTCCCA------
AACTACAATTCCCAGAATGC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTACADTTCCCA--
----HTTTCCCASG

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTACADTTCCCA-------
----ATTTCCCAGVAKSCY

MA0088.1_znf143/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTACADTTCCCA-----------
---GATTTCCCATAATGCCTTGC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTACADTTCCCA
GTTTCACTTCCG-

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTACADTTCCCA-----
NNNTCCATCCCATAANN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTACADTTCCCA--
----ATTTTCCATT

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTACADTTCCCA---
---CACTTCCYCTTT

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTACADTTCCCA----
TAGTATTTCCGATCTT