Information for 13-CGTCTTCTGCGT (Motif 13)


Reverse Opposite:

p-value:1e-62
log p-value:-1.432e+02
Information Content per bp:1.970
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.4 +/- 57.4bp
Average Position of motif in Background81.5 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGTCTTCTGCGT
--GCTTCC----

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGTCTTCTGCGT---
CCGTCTTCCCCCTCAC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CGTCTTCTGCGT-
-------TGCGTG

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTTCTGCGT--
TNTCCTGCTGTGNNG

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTTCTGCGT--
TCNCCTGCTGNGNNN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGTCTTCTGCGT
VBSYGTCTGG-----

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGTCTTCTGCGT
--ACTTCCTBGT

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGTCTTCTGCGT
-GCCATCTG---

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGTCTTCTGCGT
--ACTTCCGGNT

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CGTCTTCTGCGT----
------TTGCGTGCVA