Information for 14-GCRCCCACTGAC (Motif 14)


Reverse Opposite:

p-value:1e-60
log p-value:-1.390e+02
Information Content per bp:1.826
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets101.8 +/- 53.3bp
Average Position of motif in Background106.9 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0155.1_INSM1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCRCCCACTGAC-
-CGCCCCCTGACA

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCRCCCACTGAC
-CRCCCACGCA-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCRCCCACTGAC
YCCGCCCACGCN-

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCRCCCACTGAC
CCCCCGCCCACGCAC

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCRCCCACTGAC---
CGACCAACTGCCGTG

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCRCCCACTGAC----
NNNTGAACTCNNTGACCTCN

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCRCCCACTGAC----
TGACCCAGTGACCTAC

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCRCCCACTGAC-
GGTCCCGCCCCCTTCTC

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCRCCCACTGAC
AGGAGACCCCCAATTTG

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCRCCCACTGAC----
CGACCAACTGCCATGC