Information for 13-TGCTTCGGCT (Motif 19)


Reverse Opposite:

p-value:1e-40
log p-value:-9.300e+01
Information Content per bp:1.959
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif60.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets94.3 +/- 50.6bp
Average Position of motif in Background97.1 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCTTCGGCT
-GCTTCC---

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCTTCGGCT
-NCGTCAGC-

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCTTCGGCT
-GCTCCG---

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCTTCGGCT
--CTTCCGGT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGCTTCGGCT-
------NGCTN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCTTCGGCT-
-ACTTCCGGNT

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTTCGGCT-
-ACTTCCGGTT

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTCGGCT---
NTGGTTTCGGTTNNN

MA0081.1_SPIB/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCTTCGGCT
---TTCCTCT

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCTTCGGCT
HACTTCCGGY