Homer Known Motif Enrichment Results (output)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 7886, Total Background Sequences = 40496
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1YY1(Zf)/Promoter/Homer1e-603-1.390e+030.0000981.012.44%530.51.31%motif file (matrix) pdf
2CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-190-4.380e+020.0000538.06.82%572.71.41%motif file (matrix) pdf
3BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-100-2.319e+020.0000782.09.92%1731.34.26%motif file (matrix) pdf
4OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-97-2.246e+020.0000253.03.21%244.80.60%motif file (matrix) pdf
5GFY-Staf(?,Zf)/Promoter/Homer1e-68-1.575e+020.0000244.03.10%320.80.79%motif file (matrix) pdf
6GFY(?)/Promoter/Homer1e-44-1.034e+020.0000209.02.65%338.20.83%motif file (matrix) pdf
7Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-43-1.010e+020.0000363.04.60%822.52.02%motif file (matrix) pdf
8Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-40-9.367e+010.00001127.014.30%3882.59.56%motif file (matrix) pdf
9Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-39-9.164e+010.00001541.019.55%5724.514.09%motif file (matrix) pdf
10Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-39-9.028e+010.00002777.035.23%11533.528.39%motif file (matrix) pdf
11Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-38-8.770e+010.0000256.03.25%521.41.28%motif file (matrix) pdf
12ETS(ETS)/Promoter/Homer1e-33-7.724e+010.0000638.08.09%1982.04.88%motif file (matrix) pdf
13Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-32-7.582e+010.00001102.013.98%3951.79.73%motif file (matrix) pdf
14ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-30-7.004e+010.0000980.012.43%3480.78.57%motif file (matrix) pdf
15GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-29-6.875e+010.00001142.014.49%4205.510.35%motif file (matrix) pdf
16ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-26-6.163e+010.00001536.019.48%6084.614.98%motif file (matrix) pdf
17NFY(CCAAT)/Promoter/Homer1e-23-5.508e+010.0000779.09.88%2766.76.81%motif file (matrix) pdf
18ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-21-5.043e+010.00001171.014.85%4568.211.24%motif file (matrix) pdf
19ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-18-4.196e+010.00001510.019.16%6278.015.45%motif file (matrix) pdf
20EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-18-4.152e+010.0000636.08.07%2294.25.65%motif file (matrix) pdf
21Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-18-4.146e+010.00001064.013.50%4210.710.36%motif file (matrix) pdf
22Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-17-3.950e+010.0000321.04.07%993.52.45%motif file (matrix) pdf
23Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-17-3.949e+010.0000154.01.95%366.70.90%motif file (matrix) pdf
24EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-16-3.887e+010.00001155.014.65%4670.211.50%motif file (matrix) pdf
25RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-16-3.883e+010.0000152.01.93%363.00.89%motif file (matrix) pdf
26Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-16-3.811e+010.00001036.013.14%4133.610.17%motif file (matrix) pdf
27BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-15-3.663e+010.00001058.013.42%4258.110.48%motif file (matrix) pdf
28Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-14-3.310e+010.0000998.012.66%4039.99.94%motif file (matrix) pdf
29AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-14-3.285e+010.00001082.013.73%4433.910.91%motif file (matrix) pdf
30CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-13-3.192e+010.0000433.05.49%1524.33.75%motif file (matrix) pdf
31MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-13-3.182e+010.00001341.017.01%5670.313.96%motif file (matrix) pdf
32Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-13-2.999e+010.0000560.07.10%2099.85.17%motif file (matrix) pdf
33Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-11-2.603e+010.0000239.03.03%769.81.89%motif file (matrix) pdf
34E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-11-2.586e+010.00001143.014.50%4853.611.95%motif file (matrix) pdf
35ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-10-2.455e+010.0000373.04.73%1347.13.32%motif file (matrix) pdf
36TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-10-2.448e+010.0000617.07.83%2432.25.99%motif file (matrix) pdf
37Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-10-2.434e+010.00001156.014.66%4947.712.18%motif file (matrix) pdf
38TATA-Box(TBP)/Promoter/Homer1e-9-2.259e+010.0000712.09.03%2898.57.13%motif file (matrix) pdf
39CRE(bZIP)/Promoter/Homer1e-9-2.219e+010.0000302.03.83%1068.92.63%motif file (matrix) pdf
40TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-9-2.218e+010.0000370.04.69%1362.33.35%motif file (matrix) pdf
41SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-9-2.204e+010.0000850.010.78%3550.88.74%motif file (matrix) pdf
42Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-9-2.188e+010.0000474.06.01%1826.94.50%motif file (matrix) pdf
43Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-9-2.148e+010.00001091.013.84%4701.211.57%motif file (matrix) pdf
44Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-9-2.137e+010.0000861.010.92%3615.38.90%motif file (matrix) pdf
45CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-8-2.044e+010.0000197.02.50%645.81.59%motif file (matrix) pdf
46X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-8-1.955e+010.0000119.01.51%342.40.84%motif file (matrix) pdf
47Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-8-1.911e+010.0000534.06.77%2140.15.27%motif file (matrix) pdf
48VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-8-1.888e+010.0000181.02.30%593.71.46%motif file (matrix) pdf
49NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-7-1.741e+010.000067.00.85%163.80.40%motif file (matrix) pdf
50Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-7-1.724e+010.00001971.025.00%9111.622.43%motif file (matrix) pdf
51NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-7-1.639e+010.0000459.05.82%1843.14.54%motif file (matrix) pdf
52SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-7-1.632e+010.00003497.044.36%16836.041.44%motif file (matrix) pdf
53EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-6-1.601e+010.0000460.05.84%1854.74.57%motif file (matrix) pdf
54ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-6-1.513e+010.0000628.07.97%2650.86.52%motif file (matrix) pdf
55Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-6-1.505e+010.00002632.033.39%12499.630.77%motif file (matrix) pdf
56Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-5-1.372e+010.0000146.01.85%495.71.22%motif file (matrix) pdf
57MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-5-1.346e+010.0000656.08.32%2819.26.94%motif file (matrix) pdf
58TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-5-1.245e+010.0000376.04.77%1531.33.77%motif file (matrix) pdf
59Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-5-1.221e+010.0000119.01.51%397.20.98%motif file (matrix) pdf
60Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-5-1.181e+010.00001235.015.67%5665.813.95%motif file (matrix) pdf
61Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-5-1.176e+010.0000508.06.44%2159.65.32%motif file (matrix) pdf
62E-box(bHLH)/Promoter/Homer1e-5-1.166e+010.0000139.01.76%486.91.20%motif file (matrix) pdf
63PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-4-1.138e+010.0000370.04.69%1523.73.75%motif file (matrix) pdf
64GFX(?)/Promoter/Homer1e-4-1.073e+010.000147.00.60%125.00.31%motif file (matrix) pdf
65STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-4-1.048e+010.0001175.02.22%655.61.61%motif file (matrix) pdf
66PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-1.037e+010.0001991.012.57%4519.211.12%motif file (matrix) pdf
67NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-4-1.005e+010.0002472.05.99%2028.44.99%motif file (matrix) pdf
68STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-4-1.002e+010.0002544.06.90%2370.75.84%motif file (matrix) pdf
69USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-4-9.672e+000.0002428.05.43%1829.34.50%motif file (matrix) pdf
70Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-4-9.510e+000.0003403.05.11%1715.64.22%motif file (matrix) pdf
71CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-4-9.295e+000.000314.00.18%21.80.05%motif file (matrix) pdf
72MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-3-8.874e+000.0005486.06.17%2123.25.23%motif file (matrix) pdf
73NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-3-8.873e+000.000535.00.44%90.30.22%motif file (matrix) pdf
74Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-3-8.729e+000.0006388.04.92%1662.24.09%motif file (matrix) pdf
75NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-3-8.716e+000.00061354.017.18%6371.415.68%motif file (matrix) pdf
76Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-3-8.708e+000.0006183.02.32%715.61.76%motif file (matrix) pdf
77Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-3-8.471e+000.0007669.08.49%3014.67.42%motif file (matrix) pdf
78Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-8.452e+000.0007804.010.20%3671.29.04%motif file (matrix) pdf
79JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-3-8.232e+000.000982.01.04%280.70.69%motif file (matrix) pdf
80SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-3-8.149e+000.0010178.02.26%701.61.73%motif file (matrix) pdf
81Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-3-7.873e+000.0012140.01.78%535.11.32%motif file (matrix) pdf
82Sp1(Zf)/Promoter/Homer1e-3-7.821e+000.0013985.012.50%4582.311.28%motif file (matrix) pdf
83Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-3-7.652e+000.001530.00.38%78.40.19%motif file (matrix) pdf
84CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-3-7.138e+000.0025462.05.86%2055.45.06%motif file (matrix) pdf
85E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-3-6.989e+000.0029311.03.95%1339.13.30%motif file (matrix) pdf
86Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-6.908e+000.0031548.06.95%2477.66.10%motif file (matrix) pdf
87RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-2-6.621e+000.0040924.011.72%4330.110.66%motif file (matrix) pdf
88ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-2-6.544e+000.0043110.01.40%420.91.04%motif file (matrix) pdf
89STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-2-6.520e+000.0044183.02.32%751.81.85%motif file (matrix) pdf
90NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-2-6.163e+000.0062400.05.07%1785.94.40%motif file (matrix) pdf
91PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.942e+000.0076351.04.45%1556.23.83%motif file (matrix) pdf
92FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-2-5.873e+000.0081178.02.26%740.81.82%motif file (matrix) pdf
93Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-2-5.840e+000.0083203.02.58%857.72.11%motif file (matrix) pdf
94Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-2-5.716e+000.0092268.03.40%1166.22.87%motif file (matrix) pdf
95KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-2-5.546e+000.01082309.029.29%11349.527.94%motif file (matrix) pdf
96MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-2-5.519e+000.0110756.09.59%3547.78.73%motif file (matrix) pdf
97Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-2-5.334e+000.0131395.05.01%1786.84.40%motif file (matrix) pdf
98Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-2-5.082e+000.0167497.06.30%2291.75.64%motif file (matrix) pdf
99REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-2-5.045e+000.017219.00.24%51.30.13%motif file (matrix) pdf
100NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-2-5.036e+000.0172589.07.47%2744.96.76%motif file (matrix) pdf
101NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-2-5.002e+000.017625.00.32%74.30.18%motif file (matrix) pdf
102CHR(?)/Hela-CellCycle-Expression/Homer1e-2-4.800e+000.0213272.03.45%1209.32.98%motif file (matrix) pdf
103Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-4.677e+000.0238123.01.56%508.41.25%motif file (matrix) pdf
104Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-2-4.647e+000.0243901.011.43%4308.510.60%motif file (matrix) pdf
105Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-4.622e+000.0247299.03.79%1344.93.31%motif file (matrix) pdf