Information for 12-CCGKATTTTC (Motif 18)


Reverse Opposite:

p-value:1e-46
log p-value:-1.074e+02
Information Content per bp:1.879
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets110.0 +/- 55.9bp
Average Position of motif in Background103.5 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGKATTTTC
GTACATCCGGATTTTT

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCGKATTTTC--
TNNTTTCGTATTNNANN

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCGKATTTTC------
-NNAATTCTCGNTNAN

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGKATTTTC-
AAAAACGGATTATTG

MA0107.1_RELA/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGKATTTTC-
-GGGAATTTCC

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCGKATTTTC--
-----TTTTCCA

MA0078.1_Sox17/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGKATTTTC
-CTCATTGTC

MA0105.3_NFKB1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGKATTTTC--
-GGGAATTTCCC

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGKATTTTC------
-AGTATTCTCGGTTGC

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCGKATTTTC
TCGTACCCGCATCATT