Information for 9-GAGGCAWTGCCT (Motif 9)


Reverse Opposite:

p-value:1e-67
log p-value:-1.549e+02
Information Content per bp:1.945
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif28.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets98.0 +/- 50.0bp
Average Position of motif in Background102.5 +/- 53.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGCAWTGCCT
AGAGGAAGTG---

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGCAWTGCCT
AGATGCAATCCC-

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGCAWTGCCT-
GGGGCCGAGGCCTG

MA0080.3_Spi1/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GAGGCAWTGCCT
AAAAAGAGGAAGTGA--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGGCAWTGCCT
MTGATGCAAT----

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GAGGCAWTGCCT---
-----ATTTCCTGTN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAWTGCCT
ATGATGCAAT----

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAWTGCCT
ATGAGTCATNTNNT

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAGGCAWTGCCT-
GCGGAGGTGTCGCCTC

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGGCAWTGCCT
GGGGGAATCCCC