p-value: | 1e-40 |
log p-value: | -9.286e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 55.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 22.4 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 101.9 +/- 56.9bp |
Average Position of motif in Background | 95.6 +/- 59.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTGTCTGGC -CTGTCTGG- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.80 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACTGTCTGGC---- NNTNNTGTCTGGNNTNG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTGTCTGGC VBSYGTCTGG- |
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MA0092.1_Hand1::Tcfe2a/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACTGTCTGGC-- --GGTCTGGCAT |
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MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
Match Rank: | 5 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTGTCTGGC---- -CTGTCTGTCACCT |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACTGTCTGGC---- --TGTCTGDCACCT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACTGTCTGGC -TWGTCTGV- |
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MA0100.2_Myb/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACTGTCTGGC CCAACTGCCA--- |
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MA0161.1_NFIC/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | ACTGTCTGGC- -----TTGGCA |
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MA0498.1_Meis1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTGTCTGGC---- AGCTGTCACTCACCT |
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