Information for 7-TGACCCCTTGCG (Motif 7)


Reverse Opposite:

p-value:1e-69
log p-value:-1.603e+02
Information Content per bp:1.760
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets95.7 +/- 47.0bp
Average Position of motif in Background102.6 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCCCTTGCG
NNNNTTGACCCCTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----TGACCCCTTGCG
TGTCGTGACCCCTTAAT

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCCCTTGCG
NNANTTGACCCCTNNNN

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGACCCCTTGCG
ATAAATGACACCTATCA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCCTTGCG
NNNNTGACCCGGCGCG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACCCCTTGCG
TGACACCT----

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCCTTGCG
NNCNTGACCCCGCTCT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACCCCTTGCG
TGACCT------

MA0009.1_T/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCCTTGCG
TTCACACCTAG--

MA0155.1_INSM1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCCCTTGCG
CGCCCCCTGACA