Information for 9-AATCACCCGT (Motif 17)


Reverse Opposite:

p-value:1e-49
log p-value:-1.133e+02
Information Content per bp:1.530
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets84.8 +/- 57.4bp
Average Position of motif in Background85.9 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATCACCCGT
CAAATCACTG--

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATCACCCGT-
-ATCACCCCAC

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AATCACCCGT-
CGACCCAATCAACGGTG

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AATCACCCGT
GNNAGCTAATCCCCCN-

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATCACCCGT-
ATAGTTAATCCCCCTCA

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATCACCCGT-
-ATCACCCCAT

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATCACCCGT-
-NNCACCTGNN

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATCACCCGT-
ATAGTTAATCCCCCNNA

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AATCACCCGT
AAGGCGAAATCATCGCA

MA0069.1_Pax6/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATCACCCGT---
AANTCATGCGTGAA