Information for 10-GTGAGAGGGCCA (Motif 10)


Reverse Opposite:

p-value:1e-65
log p-value:-1.498e+02
Information Content per bp:1.887
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.0 +/- 57.3bp
Average Position of motif in Background77.2 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTGAGAGGGCCA
GTAGGTCACTGGGTCA

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGAGAGGGCCA
CGTGGGTGGTCC-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGAGAGGGCCA
NGCGTGGGCGGR---

MA0504.1_NR2C2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGAGAGGGCCA
AGGGGTCAGAGGTCA-

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGAGAGGGCCA
GTGCGTGGGCGGGNG-

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGAGAGGGCCA--
TGCGGAGTGGGACTGG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGAGAGGGCCA
-TGCGTGGGYG-

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGAGAGGGCCA
TGTCAGGGGGCG-

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGAGGGCCA-
ANTGCGGGGGCGGN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGAGAGGGCCA
TTGAGTGSTT--