Course Schedule
Schedule for June 20 to June 21, 2016
Workshop Q/A Forum
Post your workshop questions here!
Workshop Survey
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Class Picture
Laptop Setup Instructions
Instructions to setup your laptop can be found here.
Pre-workshop Readings
Introduction to High-Performance Computing
Introduction to Compute Canada
Additional reading on ChIP-Seq
Additional reading on Methylation analysis
Pre-workshop Tutorials
UNIX Preparation tutorials: Please complete tutorials #1-3 on UNIX
IGV Tutorial: Review how to use IGV Genome Browser if you have not used this tool before.
FastQC Introduction and examples
YouTube Playlist for Recorded Lectures
R Review Session
Day 1
Welcome
Ann Meyer
Module 1: Introduction to ChIP Sequencing and Analysis
Martin Hirst
Module 2: ChIP-Seq Alignment, Peak Calling, and Visualization
Misha Bilenky
Day 2
Module 3: Introduction to WGBS and Analysis
Guillaume Bourque
Module 4: Downstream Analyses and Integrative Tools
David Bujold